eLife10d
Global transcription factors analyses reveal hierarchy and synergism of regulatory networks and master virulence regulators in Pseudomonas aeruginosa
The transcription factor regulatory network in Pseudomonas aeruginosa is complex and involves multiple regulators that respond to various environmental signals and physiological cues by regulating ...
Frontiers17d
Citrus transcription factor CsERF1 is involved in the response to citrus tristeza disease
CsERF1 belongs to the citrus AP2/ERF transcription factor family. Methods: To determine the role of CsERF1 on CTV resistance in citrus and the effects of the exongenous hormone application on CsERF1 ...
GitHub23d
transcription-factors
Python script to quickly extract promoter and terminator regions with the NCBI API. Search for the presence of individual pattern or transcription factor responsive elements with manual sequence ...
The EMBO Journal27d
The proximity-based protein interactome and regulatory logics of the transcription factor p65 NF-κB/RELA
In contrast to the wealth of information on (predicted) DNA binding of TFs, we currently lack a global ... Taken together, these data reveal a remarkably large, dynamic and versatile (transcription ...
IEEE27d
TCR-pMHC Binding Specificity Prediction from Structure Using Graph Neural Networks
Yet, accurately constructing this map computationally remains a difficult problem. Most prior work has sought to predict TCR-peptide-MHC (TCR-pMHC) binding specificity by analyzing the amino acid ...
Frontiers4y
Characterization of Binding Properties of Individual Functional Sites of Human Complement Factor H
Although many studies have examined individual sites of Factor H, this study presents a quantitative comparison under similar conditions of the affinities and specificities of the six known binding ...